Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833270.1_cds_XP_016505180.1_18547
CDS Infomation

[gene=LOC107823097] [db_xref=GeneID:107823097] [protein=aspartyl protease family protein At5g10770-like] [protein_id=XP_016505180.1] [location=complement(join(3313..4583,5025..5196))] [gbkey=CDS]
Sequence

ATGTCACTTTGCCAATATTCCATTCTTTGTCTTCTGCTTTTTGTACTATTCTTCACTTCT
TCTGGAAATGGAGCATTTGGTCATGCAGATAATGAACTACTTCTCCCACTCAAAACACTT
CAAAGGATACAACACAGCCATTATGGACCAAGTTGTTCATCTCAAAAATCAAGAAGTGAA
AATGGGGCAACAATATTAGAAATGAAGCACAAAGATTACTGCTCTAGATCAAGAGATGAC
TTGAATGGAAGGCTGAAGAAACAATTAGTAGCTGATGATATTCGAGTTCGGTCAATGCAA
TCACATATCAAGAACATTAGTTCTCAACAAGTTGAAACTTTATCACAGACCACCCGAATT
CCTATCACTTCAGGTGTCACAATGCAGACTCTAAATTACATTGTCACAGTGACATTAGGC
GGTCGAAATATGACAGTAATTGTAGACACAGGAAGTGATCTTACTTGGGTTCAATGCCAA
CCTTGTAGATTGTGTTACAATCAACCAGAACCTCTTTTCAACCCCTCATTTTCATCTTCT
TATCGATCAGTTGTATGTAATTCATCAGCCTGTCAATCTCTTGTATCTGCAACCGGGAAT
TCAGGATTATGTGGTACTAATTCACAAGCTTGTAATTACCTTGTAAGTTATGGAGATGGA
TCATACACTAAGGGTGAACTTGGCCAGGAGCATTTGGTTCTTGGAAATAGTTCAGTTGAC
AATTTTGTTTTTGGCTGTGGTAGGAATAATAGAGGTCTGTTTGGTTTAGCTTCAGGTCTT
ATGGGACTTGGAAGGAGTGATCTTTCCTTAATATCTCAAACTTCTAATGTGTTTGGTGGC
GTTTTCTCGTATTGTTTGCCTTCAACTGACGCAGAGTCCTCTGGTTCACTAGTATTTGGT
GGTGATGCTTCAGTTTTCAAGAACTCTACACCAATCTCTTACACTAAAATGGTTCCAAAT
CCACAGCTTTTTAGCTTCTATTTTCTCAATCTAACTGGGATGACTATAGGTGGAGTTGTT
GTTCAAGATTCAAGTTTTGGCCAAAGTGGATTTCTCATTGATTCTGGCACAGTTATTACA
AGGCTTCCTCCTTCCATTTACAAAGCTGTTAAAGCTGAGTTCTTGAAACAATTTTCAGGA
TACCCTTTTGCACAAGGTTATTCAATTCTTGACACTTGTTTTGACCTCTCTGCATATGAA
GAAGTGAACATTCCAACCATTAAAATATATTTTGACGGCGGTGCTGAGATGGAAGTGGAT
GTTGCTGGTGTTTTCTATTTTGTGAAGAGTGATGCATCTCAGGTATGTTTGGCTTTGGCA
AGCCTACAATATGAAGATGAGACTGGAATTATTGGAAATTTTCAGCAGAGAAACACTAGG
GTCATATATGACACAAAGCAGTCACAAGTTGGATTTGCAAAAGAAACCTGCAGTTTCATG
TAG

Peptide Sequence

PEP ID

XP_016505180.1
PEP Infomation

PREDICTED: aspartyl protease family protein At5g10770-like [Nicotiana tabacum]
Sequence

MSLCQYSILCLLLFVLFFTSSGNGAFGHADNELLLPLKTLQRIQHSHYGPSCSSQKSRSE
NGATILEMKHKDYCSRSRDDLNGRLKKQLVADDIRVRSMQSHIKNISSQQVETLSQTTRI
PITSGVTMQTLNYIVTVTLGGRNMTVIVDTGSDLTWVQCQPCRLCYNQPEPLFNPSFSSS
YRSVVCNSSACQSLVSATGNSGLCGTNSQACNYLVSYGDGSYTKGELGQEHLVLGNSSVD
NFVFGCGRNNRGLFGLASGLMGLGRSDLSLISQTSNVFGGVFSYCLPSTDAESSGSLVFG
GDASVFKNSTPISYTKMVPNPQLFSFYFLNLTGMTIGGVVVQDSSFGQSGFLIDSGTVIT
RLPPSIYKAVKAEFLKQFSGYPFAQGYSILDTCFDLSAYEEVNIPTIKIYFDGGAEMEVD
VAGVFYFVKSDASQVCLALASLQYEDETGIIGNFQQRNTRVIYDTKQSQVGFAKETCSFM

Transcript Sequence

Gene sequence data has not been registered.